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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939934.1_cds_XP_016484322.1_75348
CDS Infomation

[gene=LOC107804891] [db_xref=GeneID:107804891] [protein=histidine--tRNA ligase, chloroplastic/mitochondrial-like isoform X2] [protein_id=XP_016484322.1] [location=complement(join(27947..28085,28220..28383,30317..30445,30615..30757,31166..31283,33544..33618,35043..35135,36606..36674))] [gbkey=CDS]
Sequence

ATGACCAGGGGAAGACGCCGTGAACATTACCAATGGAATATGGATATAATTGGTGTACCA
GATGTAATGGCTGAAGCAGAGCTGATATCTTCAATTATTACCTTCTTCAAGCGCATAGGC
CTCACAGCATCAGATGTTGGGTTTAAGATCTCCAGTAGAAAGGTCTTGCAAGAAGTGTTG
AGGTGCTATTCCGTCCCAGAAAACATGTTTGGTAGAGTTTGCATCATTATAGACAAGATT
GGAAAGATTCCAATGGATGATATCAGGAAAGATCTGCAGTCGGCTGATATGTCAGAGGTA
GCTATTGAAGAGCTATTGCAAGTCCTGTCACTGAAGTCTTTGGCAAAGTTAGAAGAAAAA
CTTGGGGCCTCAGGAGAAGCACTATCTGATTTGAAGGAACTATTCTCGCTTGCTGAAAAG
TATGGCTATTCAGAGTGGCTTCAGTTTGATGCATCAATTGTCCGTGGTTTGGCATATTAC
ACTGGGATTGTCTTTGAGGGATTTGATCGTGAAGGAAAGCTCCGGGCTATCTGTGGTGGT
GGACGATATGATCGGCTATTGTCTACCTTTGGAGGCGATGATCTTCCAGCTTGTGGATTT
GGATTTGGTGATGCTGTAATAGTAGAACTGCTCAAGGAGAGGGGACTTCTACCACAACTT
AACCTCCAAGTAGAGAACATTGTCTGCTCCCTGGATCAGGAACTTCAAGGTGCAGCATCA
GCAGTTGCCACTATTCTCAGGGAAAAGGGGCAAAGCGTTGATTTGGTTTTGGAGAACAAG
CCACTTAAGTGGGTGTTCAAGCGAGCAGCACGGATAAATGCACGCAGATTGATTTTGGTT
GGAAATGCTGAATGGCAAAAAGGTATGGTTAATGTTAAGACTCTTTCAACAGGTGAGCAA
GTGGAGATAAAAATCGATGAACTGGAGTAA

Peptide Sequence

PEP ID

XP_016484322.1
PEP Infomation

PREDICTED: histidine--tRNA ligase, chloroplastic/mitochondrial-like isoform X2 [Nicotiana tabacum]
Sequence

MTRGRRREHYQWNMDIIGVPDVMAEAELISSIITFFKRIGLTASDVGFKISSRKVLQEVL
RCYSVPENMFGRVCIIIDKIGKIPMDDIRKDLQSADMSEVAIEELLQVLSLKSLAKLEEK
LGASGEALSDLKELFSLAEKYGYSEWLQFDASIVRGLAYYTGIVFEGFDREGKLRAICGG
GRYDRLLSTFGGDDLPACGFGFGDAVIVELLKERGLLPQLNLQVENIVCSLDQELQGAAS
AVATILREKGQSVDLVLENKPLKWVFKRAARINARRLILVGNAEWQKGMVNVKTLSTGEQ
VEIKIDELE

Transcript Sequence

Gene sequence data has not been registered.